Population Structure of Phytophthora infestans from a Single Location in Poland Over a Long Period of Time in Context of Weather Conditions.
Identifieur interne : 000084 ( Main/Exploration ); précédent : 000083; suivant : 000085Population Structure of Phytophthora infestans from a Single Location in Poland Over a Long Period of Time in Context of Weather Conditions.
Auteurs : M. Janiszewska [Pologne] ; S. Sobkowiak [Pologne] ; E. Stefa Czyk [Pologne] ; J. Liwka [Pologne]Source :
- Microbial ecology [ 1432-184X ] ; 2020.
Abstract
Phytophthora infestans (Mont.) de Bary is a destructive potato pathogen. Changing weather conditions are among the factors that influence the pathogen population structure. In this study, 237 P. infestans isolates were collected from a single unprotected experimental field in an area with high late-blight pressure located in Boguchwała in the southeastern part of Poland during 15 growing seasons (2000-2014). The isolates were assessed for mating type, mitochondrial haplotype, resistance to metalaxyl, virulence, and polymorphism of 14 single-sequence repeat markers (SSRs). The results revealed 89 unique genotypes among the 237 P. infestans isolates. Eighty-seven isolates belonged to genotype 34_A1, which was detected in all the years of research except 2012. Isolates of P. infestans from individual years were very similar to each other, as shown by Nei's genetic identity based on 14 SSR markers. The obtained results on isolate characteristics were analyzed in terms of meteorological data (air temperature and precipitation) and indicated that frost, long winters, and hot, dry summers did not directly affect the P. infestans population structure. We described the variability in metalaxyl resistance and virulence among isolates of the P. infestans genotype 34_A1.
DOI: 10.1007/s00248-020-01630-6
PubMed: 33123759
Affiliations:
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Janiszewska</name><affiliation wicri:level="1"><nlm:affiliation>Plant Breeding and Acclimatization Institute - National Research Institute, Młochów Research Centre, Platanowa 19, 05-831, Młochów, Poland. m.janiszewska@ihar.edu.pl.</nlm:affiliation><country xml:lang="fr">Pologne</country><wicri:regionArea>Plant Breeding and Acclimatization Institute - National Research Institute, Młochów Research Centre, Platanowa 19, 05-831, Młochów</wicri:regionArea><wicri:noRegion>Młochów</wicri:noRegion></affiliation></author><author><name sortKey="Sobkowiak, S" sort="Sobkowiak, S" uniqKey="Sobkowiak S" first="S" last="Sobkowiak">S. 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Stefa Czyk</name><affiliation wicri:level="1"><nlm:affiliation>Plant Breeding and Acclimatization Institute - National Research Institute, Młochów Research Centre, Platanowa 19, 05-831, Młochów, Poland.</nlm:affiliation><country xml:lang="fr">Pologne</country><wicri:regionArea>Plant Breeding and Acclimatization Institute - National Research Institute, Młochów Research Centre, Platanowa 19, 05-831, Młochów</wicri:regionArea><wicri:noRegion>Młochów</wicri:noRegion></affiliation></author><author><name sortKey=" Liwka, J" sort=" Liwka, J" uniqKey=" Liwka J" first="J" last=" Liwka">J. Liwka</name><affiliation wicri:level="1"><nlm:affiliation>Plant Breeding and Acclimatization Institute - National Research Institute, Młochów Research Centre, Platanowa 19, 05-831, Młochów, Poland.</nlm:affiliation><country xml:lang="fr">Pologne</country><wicri:regionArea>Plant Breeding and Acclimatization Institute - National Research Institute, Młochów Research Centre, Platanowa 19, 05-831, Młochów</wicri:regionArea><wicri:noRegion>Młochów</wicri:noRegion></affiliation></author></analytic><series><title level="j">Microbial ecology</title><idno type="eISSN">1432-184X</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Phytophthora infestans (Mont.) de Bary is a destructive potato pathogen. Changing weather conditions are among the factors that influence the pathogen population structure. In this study, 237 P. infestans isolates were collected from a single unprotected experimental field in an area with high late-blight pressure located in Boguchwała in the southeastern part of Poland during 15 growing seasons (2000-2014). The isolates were assessed for mating type, mitochondrial haplotype, resistance to metalaxyl, virulence, and polymorphism of 14 single-sequence repeat markers (SSRs). The results revealed 89 unique genotypes among the 237 P. infestans isolates. Eighty-seven isolates belonged to genotype 34_A1, which was detected in all the years of research except 2012. Isolates of P. infestans from individual years were very similar to each other, as shown by Nei's genetic identity based on 14 SSR markers. The obtained results on isolate characteristics were analyzed in terms of meteorological data (air temperature and precipitation) and indicated that frost, long winters, and hot, dry summers did not directly affect the P. infestans population structure. We described the variability in metalaxyl resistance and virulence among isolates of the P. infestans genotype 34_A1.</div></front></TEI><pubmed><MedlineCitation Status="Publisher" Owner="NLM"><PMID Version="1">33123759</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>30</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-184X</ISSN><JournalIssue CitedMedium="Internet"><PubDate><Year>2020</Year><Month>Oct</Month><Day>29</Day></PubDate></JournalIssue><Title>Microbial ecology</Title><ISOAbbreviation>Microb Ecol</ISOAbbreviation></Journal><ArticleTitle>Population Structure of Phytophthora infestans from a Single Location in Poland Over a Long Period of Time in Context of Weather Conditions.</ArticleTitle><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00248-020-01630-6</ELocationID><Abstract><AbstractText>Phytophthora infestans (Mont.) de Bary is a destructive potato pathogen. Changing weather conditions are among the factors that influence the pathogen population structure. In this study, 237 P. infestans isolates were collected from a single unprotected experimental field in an area with high late-blight pressure located in Boguchwała in the southeastern part of Poland during 15 growing seasons (2000-2014). The isolates were assessed for mating type, mitochondrial haplotype, resistance to metalaxyl, virulence, and polymorphism of 14 single-sequence repeat markers (SSRs). The results revealed 89 unique genotypes among the 237 P. infestans isolates. Eighty-seven isolates belonged to genotype 34_A1, which was detected in all the years of research except 2012. Isolates of P. infestans from individual years were very similar to each other, as shown by Nei's genetic identity based on 14 SSR markers. The obtained results on isolate characteristics were analyzed in terms of meteorological data (air temperature and precipitation) and indicated that frost, long winters, and hot, dry summers did not directly affect the P. infestans population structure. We described the variability in metalaxyl resistance and virulence among isolates of the P. infestans genotype 34_A1.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Janiszewska</LastName><ForeName>M</ForeName><Initials>M</Initials><Identifier Source="ORCID">http://orcid.org/0000-0003-0531-6445</Identifier><AffiliationInfo><Affiliation>Plant Breeding and Acclimatization Institute - National Research Institute, Młochów Research Centre, Platanowa 19, 05-831, Młochów, Poland. m.janiszewska@ihar.edu.pl.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sobkowiak</LastName><ForeName>S</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Plant Breeding and Acclimatization Institute - National Research Institute, Młochów Research Centre, Platanowa 19, 05-831, Młochów, Poland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Stefańczyk</LastName><ForeName>E</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Plant Breeding and Acclimatization Institute - National Research Institute, Młochów Research Centre, Platanowa 19, 05-831, Młochów, Poland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Śliwka</LastName><ForeName>J</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Plant Breeding and Acclimatization Institute - National Research Institute, Młochów Research Centre, Platanowa 19, 05-831, Młochów, Poland.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>PW Task 3.1</GrantID><Agency>Polish Ministry of Agriculture and Rural Development</Agency><Country></Country></Grant><Grant><GrantID>1-3-00-1-02</GrantID><Agency>Polish Ministry of Science and Higher Education</Agency><Country></Country></Grant><Grant><GrantID>MN 1-3-00-3-01</GrantID><Agency>Polish Ministry of Science and Higher Education</Agency><Country></Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>10</Month><Day>29</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Microb Ecol</MedlineTA><NlmUniqueID>7500663</NlmUniqueID><ISSNLinking>0095-3628</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Late blight</Keyword><Keyword MajorTopicYN="N">Metalaxyl</Keyword><Keyword MajorTopicYN="N">Microsatellite markers</Keyword><Keyword MajorTopicYN="N">Potato</Keyword><Keyword MajorTopicYN="N">SSR</Keyword><Keyword MajorTopicYN="N">Solanum tuberosum</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2020</Year><Month>07</Month><Day>17</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2020</Year><Month>10</Month><Day>06</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>10</Month><Day>30</Day><Hour>5</Hour><Minute>56</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2020</Year><Month>10</Month><Day>31</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>10</Month><Day>31</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>aheadofprint</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">33123759</ArticleId><ArticleId IdType="doi">10.1007/s00248-020-01630-6</ArticleId><ArticleId IdType="pii">10.1007/s00248-020-01630-6</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Pologne</li></country></list><tree><country name="Pologne"><noRegion><name sortKey="Janiszewska, M" sort="Janiszewska, M" uniqKey="Janiszewska M" first="M" last="Janiszewska">M. Janiszewska</name></noRegion><name sortKey=" Liwka, J" sort=" Liwka, J" uniqKey=" Liwka J" first="J" last=" Liwka">J. Liwka</name><name sortKey="Sobkowiak, S" sort="Sobkowiak, S" uniqKey="Sobkowiak S" first="S" last="Sobkowiak">S. Sobkowiak</name><name sortKey="Stefa Czyk, E" sort="Stefa Czyk, E" uniqKey="Stefa Czyk E" first="E" last="Stefa Czyk">E. Stefa Czyk</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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